FP7Reintegration grant2012–2016

ND8-NOS · The role of the ubiquitin-like molecule NEDD8 in nucleolar signalling

FP7 — People (Marie Curie Actions)

Duration
2012-06-01 → 2016-05-31
EU contribution
€100,000
Participants
1
Scheme
MC-CIG

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Results in brief

The role of the ubiquitin-like molecule NEDD8 in nucleolar signalling

Cell growth (increase in size) and cell cycle (increase in cell number) are fundamental aspects of cell behaviour in all organisms. Deregulation of mechanisms that control cell growth often leads to a variety of pathological conditions, including cancer, inflammatory and metabolic diseases. Similarly, mutations in genes that control cell cycle such as p53, contribute to genomic instability and cancer development. While cell growth and cell cycle are separable processes, it is clear that there is an interconnection, with cell growth being rate limiting for cell cycle. It is now established that the nucleolus, a nuclear structure where the production of ribosomes (protein synthesis “machines”) takes place, is also essential for transmitting cell growth defects to cell cycle regulators. Our group’s research is focussed on a family of small proteins called ubiquitin and ubiquitin-like proteins. A key discovery of our team, which formed the basis for the MC-CIG proposal, was the identification of the ubiquitin-like protein NEDD8 as regulator of the coordination between cell growth and the cell cycle. We found that NEDD8 is covalently attached to proteins that compose the ribosome (Ribosomal Proteins) in the nucleolus. This allows the correct localisation of Ribosomal Proteins in the nucleolus allowing normal cell growth. The objective of the proposal was to expand our studies on the role of NEDD8 in nucleolar function; To determine how NEDD8 controls the organisation of the nucleolar proteome and function and understand the implication of such findings in the co-ordination between cell growth and cell cycle. Additionally, our aim was to develop genetic model systems to determine the evolutionary conservation of our findings. Overview of Results We employed quantitative mass-spectrometry in combination with microscopy in human cells and determined how the nucleolar proteome and morphology changes upon inhibition of NEDD8. For this, we used a recently developed small molecule (MLN4924) that specifically and potently inhibits the NEDD8 pathway. Our studies show that inhibition of NEDD8 has a profound effect both on nucleolar morphology and distribution of nucleolar proteins, beyond our original findings on Ribosomal Proteins. We also determined the biological outcome for these effects. We found that the observed disruption of the nucleolus upon NEDD8 inhibition causes the activation of the p53 tumour suppressor, resulting in cell cycle arrest. Importantly, these findings were confirmed in C.elegans nematodes (worms), a model organism that is separated from humans by over 600 million years of evolution. Our studies revealed a role for the NEDD8 pathway in controlling nucleolar morphology and cell cycle regulation that is highly conserved throughout evolution. Impact of Results Post-translational modification of proteins with ubiquitin and ubiquitin-like molecules is a major mechanism of protein function regulation. The realisation that these pathways are involved in the regulation of almost every biological process in the cell has created a huge interest amongst scientists, including major Pharmaceutical industries. These pathways are now targets for therapeutic intervention for the treatment of diseases such as cancer. The inhibitor of the NEDD8 pathway (MLN4924) is the second developed inhibitor targeting the ubiquitin/ubiquitin-like molecules pathways that advanced into clinical trials. Therefore, it is important to elucidate the pathways controlled by NEDD8. Our studies provide an example of co-ordination between cell growth (nucleolus) and the cell cycle (p53 tumour suppressor) and potential mechanistic insights on the anti-tumour activity of NEDD8 inhibitors. Dr Dimitris Xirodimas CRBM-CNRS 1919 Route de Mende 34293, Cedex 5 Montpellier France Email: dimitris.xirodimas@crbm.cnrs.fr Website: http://www.crbm.cnrs.fr/index.php/en/dimitris-xirodimas-uk

Data: CORDIS, © European Union

Project objective

Ubiquitin and ubiquitin-like molecules (Ubls) such as SUMO and NEDD8 regulate myriad of biological processes. NEDD8 was discovered as one of 10 genes that are down regulated in mice brains during development. Amongst the family of Ubls, NEDD8 has the highest homology and identity to ubiquitin, but a distinct conjugation pathway exists that leads to the covalent conjugation of NEDD8 to substrate proteins. Genetic experiments in plants, S. pombe, Drosophila, C. elegans, and mice, have demonstrated a vital role for NEDD8 in cell growth, viability and development. However, compared to ubiquitination or SUMO conjugation much less is known about molecular targets and pathways controlled by NEDD8.We established proteomic methods to identify NEDDylated proteins, which showed that the NEDD8 proteome is more diverse than previously thought. Following on the proteomic studies we discovered a new role for NEDD8 in controlling the function of the nucleolus as a sensor of perturbations in cell growth. Additional proteomic studies defined the molecular changes in the nucleolar proteome caused by inhibition of NEDDylation, establishing the nucleolus as key target for the NEDD8 pathway. Recently, we developed a genetic model system (C. elegans) for components of the NEDD8 machinery. Our goal is to capitalize on these discoveries and further develop an internationally competitive research program in: The role of NEDD8 in controlling the nucleolus and to establish genetic model systems for nucleolar signalling.As inhibitors of NEDDylation are in clinical trials for the treatment of cancer, we believe our studies will also identify targets and mechanisms for the action of these potential chemotherapeutics.

Original text from CORDIS.

Participants

  • CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS · ParisCoordinatorFrance

Links

Data: CORDIS, © European Union