H2020Individual fellowship2016–2018

BIO-Banana IN and OUT · BIO: Banana IN and OUT - engineering resistance against Panama disease in banana

Horizon 2020 — Marie Skłodowska-Curie Actions

Duration
2016-04-01 → 2018-03-31
EU contribution
€183,455
Participants
1
Scheme
MSCA-IF

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Results in brief

BIO: Banana IN and OUT - engineering resistance against Panama disease in banana

Most modern cultivated varieties (cultivars) of edible bananas originated from two wild, seeded banana ancestors; Musa acuminata and Musa balbisiana. Banana is plagued by several major diseases of which, arguably, Fuarium wilt caused by infection with Fusarium oxysporum f. sp. cubense (Foc) is one of the most destructive. The disease can cause up to 100% yield loss and has the capacity to decimate commercial banana cultivation. Fusarium wilt caused by Foc tropical race 4 (TR4) is estimated to threaten >80% of the world’s banana crop, including cooking banana cultivars that provide food for approximately 400 million people. TR4 is a single clonal line of Foc, which has been disseminated by humans from its origin in South East Asia to distances as far as Jordan and Mozambique. Since Foc is a vascular pathogen, once infection is detected, there is no conventional way of combating the disease. Traditional breeding of banana is expensive, time- and space-consuming. The key goals of this project was to create a resistance against Fusarium wilt in banana. To do so, I first established a greenhouse pathogenicity assay using small banana plantlets that allows quick resistance screening even in small greenhouses in temperate countries. We will publish this method open access so that it can replace current, cumbersome pathogenicity testing, which requires bigger plants and therefore lots of greenhouse space. Genetic engineering of existing cultivars is one solution to combat current threats of banana production. Initially, we planned to introduce a resistance gene and inactivate a susceptibility gene for Foc TR4 to create resistance. Neither of these strategies turned out to be perfect. In contrast to the interaction of tomato with F. oxysporum f. sp. lycopersici, the receptor kinase encoding susceptibility gene does not seem to be a susceptibility gene for banana, since the Foc effector peptide RALF that is targeting this receptor kinase is not a strong virulence factor for Foc. Likewise, the tomato resistance protein I-3 seems to requires additional tomato factors and is therefore not suitable for transfer in banana. Since, genetically engineered bananas might have faced difficultires with consumer acceptance and would have been difficult to de-regulate, we decided to change our strategy and to explore biologicals as a means to control Fusarium wilt disease. Biologicals are antagonistic microbial strains or molecules. They are a promising solution to control Fusarium wilt , expecially for smallholder farmers, because they are inexpensive and offers potentially season-long disease control. We successfully identified a bacterial strain that is able to inhibit Foc growth.

Data: CORDIS, © European Union

Project objective

Panama disease is a devastating disease of banana caused by the fungus Fusarium oxysporum f.sp. cubense. A new race called tropical race 4 (TR4) is estimated to threaten >80% of the world’s bananas and can cause up to 100% yield loss. The disease is detrimental to global banana production, but also for small-holder farmers especially in Africa, because Panama disease also affects plantain cultivars that provide food for approximately 400 million people. In the 1950s, Panama Disease almost wiped out commercial banana cultivation in Central America. Because the fungus is a vascular pathogen, there is no effective way of combating the disease with crop protection compounds. In addition, the fungus can persist in the soil for many years. Traditional breeding of banana is time consuming and has had only limited success in delivering acceptable cultivars and effective resistance. The key objectives of this proposal are to employ state-of-the-arts biotechnological solutions such as genome editing using CRISPR/Cas and high-throughput resistance gene engineering to introduce a resistance gene and deactivate a susceptibility gene in banana with the global aim of creating a banana cultivar that is resistant to Panama disease.

Original text from CORDIS.

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Data: CORDIS, © European Union