H2020Individual fellowship2017–2019

EpiTarget · Epigenome-targeted therapy for cholangiocarcinoma.

Horizon 2020 — Marie Skłodowska-Curie Actions

Duration
2017-02-01 → 2019-01-31
EU contribution
€200,195
Participants
1
Scheme
MSCA-IF-EF-ST

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Results in brief

Epigenome-targeted therapy for cholangiocarcinoma.

Cholangiocarcinoma (CCA) comprise a family of rare orphan malignancies arising throughout the biliary tract. These cancers are typified by asymptomatic presentation, late diagnosis and extremely poor prognosis. The majority (70-90%) of CCA patients who are diagnosed with advanced disease, in addition to resected patients whose tumours recur, undergo chemotherapy with gemcitabine and cisplatin. This regimen is purely palliative, non-FDA-approved for CCA and median patient survival under this treatment regimen is less than 12 months. Overall, 0-5% CCA patients remain alive at 5 years post-diagnosis. Unlike other cancers, CCA incidence and mortality rates have increased among males and females in Europe and the wider world. Together, these atypical clinical trends indicate CCA patients comprise a growing demographic of society for whom modern healthcare can do little. Furthermore, even if robust biomarkers for early disease detection are discovered in the future, general population screening for this rare disease would be practically and economically infeasible. Therefore, it is evident that new therapeutic regimens are urgently needed for the majority of patients who present with advanced and metastatic disease. Initially, the interpretation of sequencing studies in CCA was somewhat bleak as they painted a picture of biliary tumours as highly heterogeneous malignancies with low-to-moderate mutation frequencies in ‘classic’ cancer-associated genes and identified significant proportions of patients with no mutations at all in such genes. However, these studies universally highlighted recurrent mutations in epigenetic regulators which, given their normal function in epigenome homeostasis, implicates extensive epigenome dysregulation in CCA. Epigenome-targeted therapy affords several advantages over mutation-based approaches, including the innate reversibility of epigenetic marks and the fundamental importance of epigenetic plasticity and remodelling to chemoresistance and metastasis. Accordingly, the objectives of this EpiTarget fellowship were to decipher the genomic and epigenomic landscapes of patient tumours and synergistically evaluate the therapeutic potential of clinically-tolerable epigenetic drugs in CCA.

Data: CORDIS, © European Union

Project objective

For > 70% of cholangiocarcinoma (CCA) patients, no curative treatment is available at time of diagnosis and they proceed directly to palliative chemotherapy with virtually 0% surviving at 5 years. Breaking overall cancer trends, CCA mortality rates are escalating among both sexes in the EU, exacerbating this clinical demographic of intractable patients. Recently, a deluge of deep sequencing studies have identified recurrent mutations in epigenetic enzymes in CCA, prompting a turning point in our view of the molecular architecture of this devastating malignancy. Unlike traditional mutations, epigenetic lesions or ‘epimutations’ are intrinsically reversible and, therefore, may comprise an optimal Achilles heel to target for therapeutic benefit. However, to streamline epigenome-driven therapy to the clinic, we first need to clarify molecular and cellular responses to epigenetic manipulation in different CCA models. Accordingly, I have 3 specific objectives of this proposal: i) I plan to carry out a comprehensive in vitro epi-drug screen to determine which enzymatic targets have the greatest anti-neoplastic activity; from this, ii) I will characterize the epigenomic changes that underpin such phenotypic rescue; finally, iii) I will compare the therapeutic effects of the top global-acting epi-drug versus target-specific epigenetic editing (Epi-CRISPR) of the most recurrent epimutation in vivo. Accomplishment of these objectives will improve our understanding of cholangiocarcinogenesis and also address the unmet clinical need for novel therapeutic targets in this cancer demographic with abysmal prognosis. The project will be supervised by Dr. Jesper Andersen, a world-leading expert in hepatobiliary cancer genomics, and will draw extensively on his expansive patient bio- and data-bank. Through this work, I aim to broaden my scientific expertise (including technical and transferable skills) and to establish myself as an independent researcher in translational epigenomics.

Original text from CORDIS.

Participants

  • KOBENHAVNS UNIVERSITET · KOBENHAVNCoordinatorDenmark

Links

Data: CORDIS, © European Union