StressEBOV · Ebola virus manipulation of the cellular stress responses
Horizon 2020 — Marie Skłodowska-Curie Actions
- Duration
- 2017-04-01 → 2019-03-31
- EU contribution
- €183,455
- Participants
- 1
- Scheme
- MSCA-IF-EF-ST
Lines connect the coordinator with its partners.
Results in brief
Ebola virus manipulation of the cellular stress responses
Ebola virus (EBOV) is a highly pathogenic filovirus causing severe haemorrhagic fever. It causes recurrent epidemics, like in 2014 in Western Africa where about 28,000 people were infected of which over 11,000 died or the current ongoing epidemic in Democratic Republic of Congo where so far 1926 people were infected of which 1287 died. Although potential vaccines and drugs are being used, no treatment has been approved. Therefore, understanding the molecular and cellular regulation of EBOV replication is fundamental to the development of novel treatments. EBOV is a nonsegmented negative-strand (NNS) RNA virus encoding nine proteins. After entry, EBOV replicates in the cytoplasm of infected cells in inclusion bodies, non-membranous organelles that separate by density from the rest of the cytoplasm. However, the exact mechanism of EBOV transcription and replication is mostly assumed based on other NNS viruses. Viruses replicate in host cells, hijacking the cell machinery as well as evading the antiviral response. Likewise, host cells have evolved mechanisms to sense the presence of foreign nucleic acids (e.g. vRNA). The synthesis of vRNAs triggers a cellular antiviral response via three distinct but linked mechanisms: (1) RNA-sensing by RIG-I and MDA5 leading to interferon (IFN) production, the host antiviral protein to activate innate cells, (2) RNA-sensing by the RNA-dependent protein kinase (PKR), inhibiting translation, leading to a host cell shut-off, and (3) formation of stress granules (SGs) to inhibit viral replication and store cellular mRNAs during stress to prevent them from degradation. However, the impact of SGs on EBOV still remains poorly understood. SGs are non-membrane-bound cytosolic mRNA-protein granules that form in response to stress, such as viral infection. Stress can lead to the activation of PKR which phosphorylates eIF2, inhibiting translation and leading to sequestration of mRNAs. The assembly and disassembly of SGs is dynamic and modulates the cellular stress response as well as viral replication. Moreover, antiviral SGs have been reported to form in response to viral infection serving as amplification sites for antiviral IFN induction. Therefore, RNA viruses have evolved mechanisms to dysregulate SGs in three ways: (1) inhibition of SG formation by PKR, (2) cleavage of SG proteins or (3) sequestration of SG components. Recently, EBOV has been reported to partially inhibit the formation of SGs by expression of the viral VP35. In addition, EBOV recruits some SG-inducing proteins to its inclusion bodies, whereas redistributing others. However, the impact of the cellular stress response on EBOV replication and how EBOV and VP35 regulate this response is poorly defined. Therefore, this proposal aims to investigate the anti-immunity and pro-replication functions of VP35 in the context of the polymerase complex and viral replication using a transcription- and replication-competent virus-like particle system (EBOV trVLP) by addressing the following aim: To investigate the impact of SG proteins on EBOV transcription/replication and manipulation by VP35
Data: CORDIS, © European Union
Project objective
Ebola virus (EBOV) is a highly pathogenic filovirus that causes severe haemorraghic fever and killed over 11,000 people during the recent epidemic in Western Africa. Although potential vaccines and drugs are being tested, no treatment has been approved. Therefore, understanding the cellular regulation of EBOV replication is fundamental to develop novel treatments. EBOV is a nonsegmented negative-strand RNA virus for which research is limited to BSL4 laboratories. However, a recent reverse genetic system using tetracistronic transcription- and replication-competent virus-like particles (trVLPs) allows modelling of the entire EBOV life cycle under BSL2 conditions. The EBOV genome is transcribed and replicated by the viral polymerase complex but the regulation of these processes remains poorly characterised. EBOV RNAs can also trigger antiviral responses via cytoplasmic RNA-sensors RIG-I and PKR, the latter also promoting stress granule (SG) formation. While EBOV inhibits RNA-sensing, the impact of SGs on EBOV is unknown. Therefore, I will investigate the role of cellular stress responses on EBOV replication and their potential counteraction by the EBOV VP35 protein using the trVLP system. Firstly, I will analyse the impact of SGs on EBOV replication by overexpression and CRISPR/Cas9 depletion of SG proteins. Using a panel of VP35 mutants, I will also investigate its potential to counteract SGs by automated flow cytometric image acquisition (Imagestream). Secondly, I will identify the EBOV polymerase complex interactome during infection using two distinct proteomic approaches: co-purification with a VP35-GFP fusion protein(GFP-trap) and VP35biotin-ligase proximity tagging (BioID2). Candidate VP35 cofactors will be validated by biochemical interaction, CRISPR-knockout and live cell microscopy to determine their role in EBOV replication. In summary, this project will increase the understanding of EBOV replication and identify new therapeutic targets.
Original text from CORDIS.
Participants
- KING'S COLLEGE LONDON · LondonCoordinatorUnited Kingdom
Links
- View on CORDIS
- DOI: 10.3030/750621
- https://www.kcl.ac.uk/lsm/research/divisions/diiid/departments/infectious/research/neil/lab1
Data: CORDIS, © European Union
