MaLeR · Machine Learning applied to Reactivity: combination of HDNNs with ReaxFF
Horizon 2020 — Marie Skłodowska-Curie Actions
- Duration
- 2018-12-01 → 2020-11-30
- EU contribution
- €165,599
- Participants
- 1
- Scheme
- MSCA-IF-EF-SE
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Results in brief
Machine Learning applied to Reactivity: combination of HDNNs with ReaxFF
Machine learning (ML) methods have become increasingly important in business and science for making predictions based on the substantial amount of data that many organizations collect or generate. ML methods are extremely powerful, since computers are much better suited than humans to identify correlations. In computational chemistry and materials science, a typical scientific goal is to predict properties of different molecules and compounds. Computer simulations generate new, physically meaningful data, based on some predefined rule set. In lieu of an actual experiment, which can be costly and dangerous for both people and the environment, simulations are used to answer the scientist’s questions. The main scientific goal of this project was to explore and apply ML techniques to predict chemical reactivity of molecules and compounds. The rate of chemical reactions can be obtained through computer simulations, if the potential energy surface (the PES) is known. For each possible placement of some collection of atoms in 3-dimensional space, a single number, namely the potential energy, determines how likely that placement of atoms is at any given thermodynamic condition (temperature and pressure). Predicting the potential energy surface for different molecules can be done through quantum-chemical calculations, for example based on density functional theory (DFT) or coupled cluster (CC). However, such calculations are computationally demanding, and it is not feasible to perform such calculations for very large (i.e., realistic) systems. The main scientific goal of this project was to provide a much faster way of evaluating the potential energy during computer simulations, parameterizing force fields and ML methods to predict the potential energy.
Data: CORDIS, © European Union
Project objective
Computational chemistry and materials science rely on accurate methods for calculating the thermodynamic and kinetic stabilities of different compounds. In order to model large and realistic chemical systems, computationally efficient methods like force-fields are needed. Force-fields have physically motivated functional forms, but are not flexible enough to accurately describe most chemical reactions. Here, we intend to alleviate this problem by combining a state-of-the-art reactive force field, ReaxFF, with artificial neural networks (NNs). NNs constitute an example of machine learning (ML) methods, and are extremely fast to compute. Due to their very flexible functional forms, NNs can be parameterized to reproduce any other target function, which here is the error made by ReaxFF. By combining ReaxFF with the variant of NNs known as high-dimensional neural networks (HDNNs), the resulting “ReaxFF+HDNN” method will provide an all-purpose computationally efficient method for applications in chemistry, biochemistry, and materials science. The developed method will first be applied to unravel high-temperature fullerene reconstruction mechanisms, a notorious case where the original ReaxFF functional form has been shown to be inadequate. The combination of HDNNs with the more computationally expensive semi-empirical density functional based tight-binding method, DFTB, will also be explored. The development and implementation will take place at SCM in Amsterdam, which has a long-standing history of modern ReaxFF method developments.
Original text from CORDIS.
Participants
- SOFTWARE FOR CHEMISTRY & MATERIALS BV · AMSTERDAMCoordinatorNetherlands
Links
- View on CORDIS
- DOI: 10.3030/798129
- https://www.scm.com/about-us/eu-projects/machine-learning-applied-to-reactivity-maler/
Data: CORDIS, © European Union
