H2020Individual fellowship2019–2021

TRACERxTME · Constructing an evolutionary atlas of the immune landscape in lung cancer

Horizon 2020 — Marie Skłodowska-Curie Actions

Duration
2019-04-01 → 2021-03-31
EU contribution
€212,934
Participants
1
Scheme
MSCA-IF-EF-ST

Lines connect the coordinator with its partners.

Results in brief

Constructing an evolutionary atlas of the immune landscape in lung cancer

Lung cancer is the leading cause of cancer-related deaths worldwide, accounting for 1.8 million deaths globally in 2020. This is largely due to the fact that lung tumours change over time by acquiring new mutations, making treatment difficult. This is called tumour evolution, and through an increased understanding of this process we will be able to better treat patients by tailoring treatments to individuals. TRACERx (TRAcking Cancer Evolution through therapy (Rx)) is a prospective clinical trial that aims to do just that by following over 800 lung cancer patients starting from diagnosis through surgery and relapse. This study has uncovered that the more diverse a patient’s tumour at time of surgery, the worse their outcome. Diversity can be thought of as the number of tumour cell lineages that have evolved to result in the mass detected at diagnosis. From Darwinian principles, we know the environment plays a large part in shaping the evolution of species. This project aimed to increase our understanding of how the immune system acts as an environmental force to shape the evolution of lung tumours. At the Francis Crick Institute, with the support of the European Commission and Bristol Myers Squibb, we have developed a method to look at lung cancer cells in their native environment in unprecedented detail. We have used this method to understand whether the immune system is activated or repressed and how it changes over time. We were also able to integrate detailed clinical and genetic information to understand the relationship between particular subtypes of lung cancer, lung cancer diversity, and the corresponding immune response. The outputs of this work will help inform the rational design of new therapies with the goal of activating the immune system to ultimately improve lung cancer patient outcomes.

Data: CORDIS, © European Union

Project objective

The immune system imposes a continuous selective pressure that influences the evolutionary trajectories of tumour cell populations. The interplay between evolving genetics of tumour cells and the corresponding immune response is poorly understood. A deeper understanding of tumour microenvironmental constraints upon cancer evolution may define an evolutionary rulebook and help to inform the rational and personalized design of combination immunotherapies for the treatment of cancer. In this study, we aim to integrate detailed genomic information from the TRACERx lung cancer cohort (TRAcking lung Cancer Evolution through therapy (Rx), a multiregion longitudinal study aiming to study >5000 tumour regions from 842 patients) with highly multiplexed tumour microenvironment imaging mass cytometry data in order to decipher the dynamics of distinct microenvironmental cell types during the disease course and tentatively begin to construct the rulebook of cancer. We will characterize how the tumour genome and microenvironment evolves throughout the disease course by analyzing multiregion tumour samples taken at time of surgery, relapse and death through the fast-autopsy PEACE study (Posthumous Evaluation of Advanced Cancer Environment). Successful completion of these aims will generate the most complete understanding of the lung tumour microenvironment to date within the contexture of the evolving tumour genome. This knowledge will ultimately inform the design of innovative precision medicine strategies in lung cancer.

Original text from CORDIS.

Participants

  • THE FRANCIS CRICK INSTITUTE LIMITED · LondonCoordinatorUnited Kingdom

Links

Data: CORDIS, © European Union