H2020Individual fellowship2020–2022

LYSOKIN · Architecture and regulation of PI3KC2β lipid kinase complex for nutrient signaling at the lysosome

Horizon 2020 — Marie Skłodowska-Curie Actions

Duration
2020-07-01 → 2022-06-30
EU contribution
€162,806
Participants
1
Scheme
MSCA-IF

Lines connect the coordinator with its partners.

Results in brief

Architecture and regulation of PI3KC2β lipid kinase complex for nutrient signaling at the lysosome

Communication is paramount for the normal function of cells, which must relay many messages from the outside environment and within the cell to determine their actions. When communication networks break down, this can lead to human disease. One of the messages cells require is whether they have enough nutrients and should grow and multiply, or whether they should conserve resources to survive when nutrients are low. One of the ways the cell can conserve resources is through recycling molecules into their building blocks. The detection of low nutrients and the breaking down of molecules is coordinated by machinery in the cell that is situated at the cell “recycling center”, known as the lysosome. When nutrients are low, a protein called PI3KC2B moves to the lysosome and produces a lipid molecule [PI(3,4)P2] that switches off a multi-protein complex, mTORC1. How the function and location of PI3KC2B in the cell is controlled is currently not well understood. Previous data have shown that PI3KC2B interacts with mTORC1 and other lysosome resident proteins. Improper function of the lysosome leads to many human diseases such as cancer, diabetes, and neurological dysfunction, so understanding how the lysosome coordinates these functions is crucial to identifying new therapies for these diseases. To better understand how PI3KC2B and mTORC1/other proteins work in concert to control lysosome function, we set out to map the interfaces of the complexes formed between these proteins using the 2017 Nobel Prize winning technique cryo electron microscopy in combination with cellular imaging to investigate how interrupting these relationships in cells affects lysosome function and cellular communication. To date, we have identified a new interaction partner of PI3KC2B and found new aspects of how the structure of PI3KC2B mediates its own function. the knowledge we gain from this research will allow a better understanding of the lysosome. Over the next two years, we aim to complete our investigation of how PI3KC2B interacts with mTORC1 and other proteins to communicate nutrient availability within the cell.

Data: CORDIS, © European Union

Project objective

The lysosome is a eukaryotic organelle that coordinates degradative pathways with nutrient sensing and signalling. It therefore dictates cell growth and survival depending on nutrient availability. Dissecting the molecular machinery that enables these functions is of key importance to cell biology. The mTORC1 complex controls cell proliferation and metabolism by nutrient sensing at lysosomes and late endosomes (LyLEs). Recent work from the host revealed that during nutrient starvation, mTORC1 is repressed by the lipid PI(3,4)P2 at LyLEs which is produced by the class II phosphoinositide 3-kinase PI3KC2β. PI3KC2β is recruited to LyLEs via an interaction of its N-terminus with the Raptor subunit of mTORC1. The precise mechanisms of PI3KC2β regulation at LyLEs are unknown. Using a diverse suite of structural and biochemical methods, I propose to define how complex formation of PI3KC2β with mTORC1 and other LyLE associated proteins governs nutrient signaling and protein turnover at LyLEs. The proposed research may pave the way to combat diseases ranging from diabetes to cancer.

Original text from CORDIS.

Participants

  • FORSCHUNGSVERBUND BERLIN EV · BerlinCoordinatorGermany

Links

Data: CORDIS, © European Union