H2020Individual fellowship2020–2022

MemoryAggregates · Mechanism of Whi3 Aggregation and its Age-dependent Malfunction

Horizon 2020 — Marie Skłodowska-Curie Actions

Duration
2020-09-01 → 2022-08-31
EU contribution
€203,149
Participants
1
Scheme
MSCA-IF

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Results in brief

Mechanism of Whi3 Aggregation and its Age-dependent Malfunction

In this project (MemoryAggregates), our aim was to understand how cells control seemingly irreversible protein aggregation to their advantage, and how these control mechanisms are affected by ageing. We focused our investigation on a protein called Whi3, a known regulator of the cell cycle in yeast. Previous work in the lab had shown that yeast cells induce Whi3 aggregation in response to pheromone exposure that does not end in mating. This allows them to escape from the pheromone response, memorise a failed mating attempt, and avoid future mating attempts (Caudron and Barral, 2013). However, additional work in the lab had shown that Whi3 forms aggregates in old yeast cells, even if those cells are not exposed to pheromone (Schlissel et al., 2017). These key observations posed the question: how do young cells control Whi3 aggregation and how is this control affected by ageing? This is a fundamental cell biology question, but it potentially has very important societal implications. Thanks to improved knowledge, resources and healthcare, the world’s population is ageing rapidly. Neurodegenerative diseases such as Parkinson’s and Alzheimer’s diseases will become a major burden on society, and there are no disease modifying treatments available. One of the key problems we will face is to understand the biology of these diseases. We will need to understand how ageing affects cells’ abilities to control protein assembly/aggregation processes. An understanding of how cells control protein assembly/aggregation will have societal implications beyond healthcare. In synthetic biology, it will allow us to exploit the power of protein assembly to generate new functionalities, and conversely, to avoid unwanted protein aggregation. Our overall objective was to understand the differences between Whi3 assemblies/aggregates that are induced by pheromone and ageing, what their functions are, and how the cell controls their formation. Caudron, F. and Barral, Y. (2013) ‘A Super-Assembly of Whi3 Encodes Memory of Deceptive Encounters by Single Cells during Yeast Courtship’, Cell, 155(6), pp. 1244–1257. Available at: https://doi.org/10.1016/J.CELL.2013.10.046. Schlissel, G. et al. (2017) ‘Aggregation of the Whi3 protein, not loss of heterochromatin, causes sterility in old yeast cells.’, Science (New York, N.Y.), 355(6330), pp. 1184–1187. Available at: https://doi.org/10.1126/science.aaj2103.

Data: CORDIS, © European Union

Project objective

Age-associated neurodegenerative diseases are characterised by the irreversible pathological aggregation of proteins with low complexity (LC) sequences. In contrast, cells can exploit LC protein aggregation to help them adapt to changing environments. The factors that determine whether an aggregate is functional or pathological are unclear. How do cells control protein aggregation? Are age-associated diseases caused by loss of control over functional protein aggregates? To address these questions, we will study how yeast cells induce aggregation of Whi3, an LC RNA-binding protein, in order to memorise failed mating attempts. Using mass spectrometry, fluorescence microscopy and biochemical assays, we will determine whether post-translational modifications, RNA-binding and protein sequence affect Whi3 aggregation and function. We will then characterise the material properties and structures of Whi3 aggregates using cryo-electron tomography. Once we understand how cells control Whi3 aggregation, we will investigate whether this regulatory mechanism deteriorates in old cells, and whether the properties and structures of age-induced aggregates differ from their functional counterparts. These studies will improve our understanding of the largely unexplored phenomenon of functional protein aggregation, and how ageing promotes the uncontrolled protein aggregation underlying neurodegenerative diseases.

Original text from CORDIS.

Participants

  • EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZUERICH · ZuerichCoordinatorSwitzerland

Links

Data: CORDIS, © European Union