H2020Individual fellowship2021–2023

TOC-maker · The assembly and structure of the chloroplast protein import machinery in plants

Horizon 2020 — Marie Skłodowska-Curie Actions

Duration
2021-04-01 → 2023-06-29
EU contribution
€224,934
Participants
1
Scheme
MSCA-IF

Lines connect the coordinator with its partners.

Results in brief

The assembly and structure of the chloroplast protein import machinery in plants

1.1 What is the problem/issue being addressed? Plants capture solar energy and carbon dioxide to produce oxygen and chemical energy in the form of sugars by a mechanism called photosynthesis, which provides fuel for life on planet earth. Photosynthesis is driven by tiny compartments within plant and algal cells called chloroplasts, which have the status of partial independence owing to their endosymbiotic origins as photosynthetic bacteria. Chloroplasts are majorly controlled by the cell’s nucleus. Chloroplasts are protein-rich organelles, containing ~3000 different proteins which are busily engaged in conducting photosynthesis and other reactions. Such photosynthetic proteins are synthesized outside of the chloroplast by the cell’s protein manufacturing apparatus. To import these proteins from outside to the inside of the chloroplasts, the outer and inner membranes of chloroplasts are equipped with multi-protein nanomachines (complexes) called TOC and TIC, respectively. TOC is composed of a central channel (core) subunit, and two peripheral proteins (receptors) that are exposed to the outside of the chloroplast and act to trap and direct chloroplast proteins toward the channel component. Although the composition of TOC is revealed, the biogenesis, assembly, and structure of the plant TOC remains elusive. I addressed these fundamental questions in plant cell biology. The major challenges in this investigation included the rapid nature of the assembly process and the fragile nature of TOC. I overcame these challenges by generating plant TOC transgenic lines with tags (tags are utilized for capturing proteins of interest) and optimising protocols to rapidly pull-down fragile TOC complexes during chloroplast biogenesis, when photosynthesis is actively established. These biological materials and technical optimizations supported thorough biochemical and structural investigation. 1.2 Why is it important for society? The human population is growing rapidly and is predicted to reach approximately 10 billion by 2050 due to advancements in medical and economic developments as well as inadequate control measures on population growth. In addition, climate change due to anthropogenic activities exacerbates pressure on food security and natural resources. It is clear that a major challenging task of our era is to deliver increased agricultural production with resilience to environmental stresses and disease. To meet this challenge, we must develop improved crops, by delivering and then exploiting advances in our understanding of key areas in plant sciences. 1.3 What are the overall objectives? My research aim in this project was to elucidate the biogenesis, assembly, and structure of TOC complexes in plant chloroplasts, in fine molecular detail. My specific objectives were as follows: (i) Identification of assembly factors for, and elucidation of the assembly process of, TOC complexes; (ii) Structural determination of the TOC-P complex at high resolution by cryo-electron microscopy. In addition, as an MSCA-IF project, another aim was to foster my development as an independent researcher.

Data: CORDIS, © European Union

Project objective

Plants convert solar energy into chemical energy by the process called photosynthesis in a specialized compartment of the cell known as chloroplasts. Chloroplasts are majorly enriched with nucleus-encoded proteins and to import them, chloroplast outer and inner envelope membranes are equipped with apparatus called the TOC and TIC translocons, respectively. For the TOC apparatus, there are two major configurations, TOC-P and TOC-H, reported so far, which import highly abundant, Photosynthetic and Housekeeping pre-proteins, respectively. TOC-P and TOC-H are multiprotein complexes which must be specifically assembled for proper development and homeostasis of the chloroplast. Due to the dynamic nature of the translocons, component synthesis and assembly must be rapid and tightly coupled, making the process difficult to investigate. Thus, understanding the mechanisms of the assembly process is both challenging and exciting. Biogenesis of TOC complexes is rapidly enhanced during chloroplast development or de-etiolation, and I will exploit this process to investigate the assembly of different TOC configurations, using the model plant Arabidopsis thaliana. For this purpose, transgenic plants expressing epitope-tagged TOC components and cells expressing nascent polypeptides of TOC components with stalled ribosomes will be generated. Proteins transiently interacting with new TOC components, which are predicted to assist integration and assembly of the TOC complex, will be studied by using affinity purification, pulse-chase experiments, and other biochemical techniques, and thus a sequence of assembly events will be elucidated. Although the molecular composition of the TOC protein import machinery has been well studied, the detailed structural organization of TOC complexes has not yet been elucidated. I will address this knowledge gap by analysing affinity-purified TOC complexes from mature chloroplasts at high resolution by cryo-electron microscopy.

Original text from CORDIS.

Participants

  • THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD · OxfordCoordinatorUnited Kingdom

Links

Data: CORDIS, © European Union