VibMolCryst · Vibrational Spectroscopy for Molecular Crystals via Quantum-Mechanical Embedding Methods
Horizon 2020 — Marie Skłodowska-Curie Actions
- Duration
- 2020-07-01 → 2022-06-30
- EU contribution
- €174,167
- Participants
- 1
- Scheme
- MSCA-IF
Lines connect the coordinator with its partners.
Results in brief
Vibrational Spectroscopy for Molecular Crystals via Quantum-Mechanical Embedding Methods
The fact that molecules show characteristic vibrations around their most stable structure is utilized for instance in infrared (IR) spectroscopy. Such IR radiation leads mainly to localized vibrations within certain structural features (functional groups), which are used to identify present functional groups or the measured molecule itself. Nowadays, accurate vibrational spectra can also be obtained for the terahertz (THz)/far-IR region of the electromagnetic spectrum. In this frequency range, one observes characteristic collective, delocalized intermolecular modes. Such spectra can for instance be used for molecular crystals to distinguish between different crystal-packing arrangements of the same molecule (polymorphs) in a non-destructive way. Therefore, THz spectra are an invaluable tool for the design and production of pharmaceuticals or the detection of drugs and explosives in security screenings. Knowledge about polymorphs is also important for society since different polymorphs of the same pharmaceutical can exhibit quite diverse drug efficacies or bioavailabilities. Due to the complex nature of such THz spectra, insights from accurate quantum-mechanical simulations are needed for the interpretation of specific spectra and for getting a better understanding of this important frequency region in general. However, an accurate theoretical description of such intermolecular modes faces several challenges. First, the gold-standard method of quantum chemistry - CCSD(T) – cannot directly be applied to periodic systems without substantial approximations. Hence, density functional theory (DFT) has become the method of choice for molecular crystals. But even there, high-level calculations utilizing hybrid density functionals are very often already prohibitively expensive for relevant molecular crystals. Next, due to the computational complexity, the calculation of periodic vibrational spectra is mainly limited to the simplest approximations – the harmonic or the quasi-harmonic approximation. Therein, all vibrations are described independent of each other and modeled by a simple parabola and in the quasi-harmonic case the thermal expansion of the crystal is approximated by performing several harmonic calculations at difference cell volumes. However, an accurate description of THz spectra would require more sophisticated anharmonic approaches. While efforts are being made to utilize molecular dynamics approaches and vibrational self-consistent field methods to describe anharmonicities in THz spectra, we are working towards achieving this by utilizing second-order vibrational perturbation theory (VPT2) in combination with quantum-mechanical embedding methods. This means that the periodic system is treated at the much cheaper harmonic level while anharmonicities are calculated for single molecules and molecular dimers, which are subsequently incorporated into the periodic system. Therefore, the main objectives of this project are the assessment of the accuracy of VPT2 for intermolecular vibrations and the development of a corresponding embedding approach up to the calculation of anharmonic vibrational properties for molecular crystals.
Data: CORDIS, © European Union
Project objective
By this project, the routine calculation of anharmonic vibrational spectra and properties for practically relevant molecular crystals will be enabled via the usage of a quantum-mechanical (QM:QM) embedding approach. All monomers and relevant dimers are treated with a high-level method, while the fully periodic system is considered at a lower level. Highly accurate vibrational spectra can be obtained for small molecular systems with benchmark CCSD(T) utilizing second-order vibrational perturbation theory (VPT2) only with a computational cost prohibitive for routine applications involving larger systems. Therefore, the applicant will create a diverse benchmark set of monomers and molecular dimers covering a wide range of intermolecular interactions and subsequently benchmark the performance of various dispersion-inclusive density functional approximations (DFA) against CCSD(T) for vibrational properties calculated with VPT2, independent Morse oscillators, and the harmonic approximation. Next, the QM:QM embedding approach for molecular crystals will be extended from available gradients to the calculation of harmonic vibrational spectra, which will already enable the usage of hybrid DFAs at a cost comparable to the generalized-gradient approximation. Subsequently, VPT2 calculations for monomers and dimers will be incorporated in the embedding scheme and the accuracy of the so obtained anharmonic vibrational spectra will be assessed for a variety of molecular crystals using promising DFAs identified during the first stage of the project. This methodology will be computationally affordable for practically relevant molecular crystals and is expected to aid peak assignments and interpretation of low-frequency THz spectra—used for instance for the detection of explosives. This approach is also expected to increase the accuracy of calculated thermodynamical stabilities, which is critical for drug development since existing molecular crystal polymorphs are almost degenerate.
Original text from CORDIS.
Participants
- UNIVERSITAET GRAZ · GrazCoordinatorAustria
Links
Data: CORDIS, © European Union
