H2020Individual fellowship2022–2024

IMPRINT · Immunological and Microbiota Priming of the Response to Infection

Horizon 2020 — Marie Skłodowska-Curie Actions

Duration
2022-03-21 → 2024-03-20
EU contribution
€196,708
Participants
1
Scheme
MSCA-IF

Lines connect the coordinator with its partners.

Results in brief

Immunological and Microbiota Priming of the Response to Infection

The incidence of infectious diseases has declined in the past 100 years due to the widespread use of vaccines and antimicrobials, improved hygiene practices and advances in healthcare approaches. Concurrently, inflammatory disorders such as asthma, type 1 diabetes and inflammatory bowel disease have increased. However, recent global pandemics and steadily growing antimicrobial resistance show that infectious diseases remain a serious threat to human health. Exposure to microorganisms in early life is a critical process that helps to train the human immune system to recognise and respond to invading pathogens later in life. However, emerging evidence indicates that humans harbour a highly diverse community of intestinal microorganisms (gut microbiota), much of which remains uncharacterised. Therefore, microbiota-immune interactions in early life are highly complex and may influence immune responses to both infection and inflammatory disease in adulthood. The gut microbiota is limited in diversity during the first months of life. Upon the introduction of solid foods (weaning), it diversifies rapidly. This programmed diversification of the gut microbiota exposes the immune system to a vast array of microbes, antigens and metabolites. In animal models, this early-life gut microbiota ‘imprints’ tolerance in the immune system to particular inflammatory stimuli, thereby protecting mice against inflammatory disorders such as allergy and colitis. However, the mechanisms of immune imprinting remain largely unknown. Current evidence in humans is only observational. However, this evidence indicates that antibiotics and other exposures that impair the maturation of the early-life gut microbiota, such as C-section birth and formula feeding, are associated with increased risk of later immune-mediated disorders such as asthma, inflammatory bowel disease and type 1 diabetes. Similarly, early-life antibiotic exposure is associated with increased susceptibility to later infections. Therefore, the early-life gut microbiota may influence immune system responses later in life. However, the influence of the early-life gut microbiota on later life immune response to infection is poorly characterised. Understanding how the gut microbiota trains the immune system to respond to later life infection would have major implications on medical approaches to tackle infectious diseases. With ever-present threats of global pandemics and expanding antimicrobial resistance, it is essential to identify new strategies to target infectious diseases. This project has the potential to uncover novel mechanisms by which the early-life gut microbiota trains immune responses to later life infection and therefore may help to uncover novel preventative therapies or therapeutic targets for infectious diseases. The overall objectives of the project were: 1. To evaluate the impact of the gut microbiota on the susceptibility to intestinal infection in adulthood 2. To establish whether microbiota-induced immune cells in the intestine influence susceptibility and immune response to intestinal infection in adulthood 3. To identify specific gut microbes and/or microbial metabolites during weaning that promote induction of intestinal immune cells and modulate subsequent susceptibility to intestinal infection in adulthood This project found that exposure to antibiotics during early-life reduced early colonization of an intestinal pathogen (Citrobacter rodentium) in male mice during adulthood in addition to a reduced inflammatory response in the intestine. This may be due, in part, to changes induced by the early-life gut microbiota on intestinal epithelial cells. Collectively, the project found a role of the early-life gut microbiota on the immune response to infection in adulthood.

Data: CORDIS, © European Union

Project objective

Humans acquire a complex community of intestinal microorganisms in early life (gut microbiota), which helps development of the immune system, and which may reduce risk of inflammatory disease. However, these complex microbiota-immune interactions in early life are underexplored and their subsequent influence on susceptibility to infection remains unknown. The Eberl lab recently reported that a temporary intestinal inflammatory state, termed the ‘weaning reaction’, occurs in mice during a specific window in early life (2-4 weeks) in response to the rapid diversification of the gut microbiota. During weaning, the gut microbiota and its metabolites induce a sub-type of T regulatory cells in the intestine (RORγt+ Tregs) which mediate immune tolerance throughout life. Suppression of the microbiota-induced weaning reaction suppresses RORγt+ Tregs and heightens susceptibility to immunopathology such as allergy and colitis in adulthood. However, it is unknown how the weaning reaction influences the later susceptibility and response to infection. IMPRINT will investigate how the gut microbiota influences the immune system in early life to regulate the response to infection in adulthood. Using mice, this project will evaluate the impact of suppressing the weaning reaction on susceptibility to Citrobacter rodentium infection in adulthood. Next, Treg depletion models will be used to examine whether microbiota-induced Tregs during weaning influence susceptibility to C. rodentium infection in adulthood. Finally, metagenomics, metabolomics and add-back experiments will be performed to identify specific bacteria or metabolites that promote induction of Tregs during weaning and modulate subsequent susceptibility to C. rodentium infection. By combining my skills in metagenomics and metabolomics with the host lab’s expertise in intestinal immunology, IMPRINT poses potential to uncover insights into early-life microbiota-immune interactions and the pathogenesis of infectious disease.

Original text from CORDIS.

Participants

  • INSTITUT PASTEUR · ParisCoordinatorFrance

Links

Data: CORDIS, © European Union