H2020Individual fellowship2022–2025

SynBioLipid · Synthetic biology for microbial lipids production from lignocellulosic biomass using multi-functional synthetic consortia

Horizon 2020 — Marie Skłodowska-Curie Actions

Duration
2022-03-01 → 2025-02-28
EU contribution
€337,401
Participants
1
Scheme
MSCA-IF

Lines connect the coordinator with its partners.

Results in brief

Synthetic biology for microbial lipids production from lignocellulosic biomass using multi-functional synthetic consortia

The growing demand to transition towards a sustainable and low-carbon economy has driven the widespread development of microbial cell factories aimed at producing a broad range of high-value products. However, many of these bioprocesses never go beyond academic research and fail to be translated into industrial applications. This is mainly because many bio-based products are still not cost-effective compared to petroleum-derived chemicals. To overcome this issue, the efficient use of inexpensive and abundant feedstocks such as lignocellulose in the biotechnology industries is essential to position bioproduction as a more competitive alternative compared to conventional chemical processes. Several major challenges hinder profitable bioproduction using renewable feedstocks, including i) the sensitivity of microorganisms to inhibitors present in these feedstocks, ii) high costs associated with the downstream processing, and iii) the inability of microorganisms to effectively degrade inexpensive complex substrates. This project aimed to develop microbial cell factories driven by engineered yeast, Yarrowia lipolytica, to utilise renewable and abundant carbon sources, such as lignocellulose, for the bioproduction of high-value compounds with broad applications in food and pharmaceutical industries. By combining synthetic biology, adaptive laboratory evolution, and synthetic microbial communities, the project aimed to address some of the big challenges in bioprocessing such as incomplete substrate bioconversion, generation and accumulation of fermentation byproducts, and low product yields. A key focus of the project is to highlight the great potential of synthetic microbial communities for commercial applications. While microbial communities provide significant advantages over single cultures—such as improved utilisation of complex feedstocks, reduced metabolic burden on individual species, and increased resistance to toxic compounds—they have yet to be implemented in commercial settings. The project had a positive impact on the society by addressing several global challenges: i) Sustainable bioproduction: efficient utilisation of renewable and low-cost feedstocks such as lignocellulose for bioproduction advanced sustainability and circular economy. ii) Cost-effective bioprocesses: improved bioconversion yields and overcoming byproduct accumulation reduce the bioprocess costs, strengthen the bioeconomy, improve the economic viability of bio-based industries iii) Affordability and accessibility of bio-based products: Enhancing fermentation yields could lower prices for microbial products, making them more affordable and accessible to various industrial sectors and the public. This project achieved significant advancements in engineering the oleaginous yeast Yarrowia lipolytica to enhance the bioproduction of high-value compounds using lignocellulose. These advancements open opportunities for utilising microbial cell factories based on this yeast to create efficient and sustainable bioprocesses, producing high-value compounds with broad industrial applications. The outcomes of this project significantly advance the development of bio-based production technologies and pave the way for future breakthroughs in industrial biotechnology.

Data: CORDIS, © European Union

Project objective

Global transition towards a climate-neutral economy demands for the sustainable use of renewable biological resources. Microbial lipids are potential products of bio-based industries and sustainable alternatives to petroleum-derived fuels and chemicals. The commercial development of microbial lipids from inexpensive feedstocks such as lignocellulosic biomass is so far limited mainly due to the elevated production costs imposed by physicochemical pre-treatments and extraction of intracellular lipids. In addition, degradation of lignocellulose releases compounds which are toxic for most of the microorganisms. One solution is to construct engineered organisms with improved metabolic capabilities integrating pre-treatment, fermentation, detoxification and secretion of lipids. Hitherto, there is no successful research on an engineered organism which is able to do all these tasks. In fact, efficient transferring large heterologous pathways into one single microorganism is quite challenging and leads to high metabolic burden and less productivity. SynBioLipid will combine my expertise in metabolic modelling and fermentation using mixed microbial communities with the host experience in synthetic biology. It is aimed at using Yarrowia lipolytica, as a model microorganism for microbial lipids production from lignocellulosic biomass by presenting an innovative and original strategy to overcome the challenges associated with expression of large heterologous pathways. I first will generate synthetic microbial consortia comprised specialist strains, and second, will use these communities for the optimized production of microbial lipids. Each specialist strain is engineered to deliver an optimum output for one or more specific tasks. The metabolic network modelling will be integrated with synthetic biology and metabolic engineering to design and build multifunctional synthetic consortia, enabling efficient lipid production from lignocellulose.

Original text from CORDIS.

Participants

  • IMPERIAL COLLEGE OF SCIENCE TECHNOLOGY AND MEDICINE · LondonCoordinatorUnited Kingdom

Links

Data: CORDIS, © European Union