HEDoctoral network2023–2026

flIMAGIN3D · Doctoral Network for a Shared Excellence of Fluorescent Lifetime Imaging Microscopy in Biomedical Applications

Horizon Europe — Marie Skłodowska-Curie Actions

Duration
2023-01-01 → 2026-12-31
EU contribution
€2,743,459
Participants
12
Scheme
HORIZON-TMA-MSCA-DN

Lines connect the coordinator with its partners.

Results in brief

Doctoral Network for a Shared Excellence of Fluorescent Lifetime Imaging Microscopy in Biomedical Applications

Undoubtedly, fluorescence microscopy is a fundamental pillar supporting basic and applied research, particularly in biological and biomedical sciences. To the non-expert, fluorescence microscopy is primarily based on the analysis of fluorescence intensity emitted but specific molecule (fluorophores) within different spectral windows. However, other properties of light can be used for a more quantitative characterization of biological samples. For example, the average time between excitation and emission of light – the fluorescence lifetime – is modulated by changes within the fluorophore microenvironment such as pH, temperature or non-radiative energy transfer. Therefore, by mapping fluorescence lifetime values in space and time, fluorescence lifetime imaging microscopy (FLIM) provides an exquisitely quantitative characterization of the biochemical and biophysical environment of the cell. Therefore, FLIM has been integrated successfully with most imaging modalities, for example, wide-field, confocal, multiphoton microscopes and light-sheet microscopy thus permitting scientists to investigate cellular biochemistry (e.g., signalling, metabolism, molecular machinery) also in living three-dimensional cultures with low invasiveness either using endogenous or exogenous fluorophores. For these reasons, FLIM has been the key enabling technologies underpinning the discovery and characterization of a multitude of fundamental biological mechanisms. Despite its proven disruptive potential in the biomedical and tissue engineering fields, FLIM is still regarded as a specialist tool. Therefore, we propose flIMAGING3D – a doctoral training network based on an internationally competitive consortium of developers, users and industrial collaborators. flIMAGING3D aims to eliminate the technical barriers and the gap in skills that still limit the broader adoption of FLIM. The fields of Biomedical Science and Tissue Engineering are hugely important in the care of our citizens and the development of new treatments towards relieving rehabilitating diseases and traumas. Now, more than ever, quick and reliable assessment in clinically relevant models is of utmost importance. Therefore, we believe it is urgent that physicists, chemists and biomedical scientists join forces in the development of a robust and advanced user-friendly FLIM-based platform that is widely accessible to all. In flIMAGIN3D, which centres on fluorescent lifetime imaging microscopy applied to biomedical platforms in 3D, ten talented Doctoral Candidates will be recruited, trained and supervised to cohesively establish the most robust, user accessible and powerful FLIM-based platform-never achieved before, and apply it to a wide range of applications in the biological sciences. Strongly coupled and based on secondments in leading suppliers of these technologies, this will strengthen the bridge(s) needed between the various disciplines. This doctoral network will train talented doctoral candidates in the essential theories underpinning FLIM microscopy, and through the individual projects and extensive secondments in this network; elevate their projects and skills, and that of their secondment hosts to research excellence in FLIM flIMAGIN3D addresses a significant knowledge gap in the field of photonics in biology in that biomedical scientists are involved in each and every aspect of development and design, and cognisant of the wide variety of current platforms that require adaptability to such modalities. Project website:https://www.flimagin3d.com/

Data: CORDIS, © European Union

Project objective

In flIMAGIN3D, which centres on fluorescent lifetime imaging microscopy applied to biomedical platforms in 3D; ten talented Doctoral Candidates (DCs) will be recruited, trained and supervised to cohesively establish the most robust, user accessible and powerful FLIM-based platform-never achieved before, and apply it to a wide range of applications in the biological sciences. flIMAGIN3D will generate ten DCs at the cutting edge of FLIM-based biological imaging who will spearhead, and go onto catalyse clusters of FLIM excellence across Europe; each intertwined within a collaborative network that will extend beyond the time-frame of the program. This doctoral network will train talented doctoral candidates in the essential theories underpinning FLIM , and through the individual projects and extensive secondments in this network; elevate their projects and skills, and that of their secondment hosts to research excellence in FLIM flIMAGIN3D addresses a significant knowledge gap in the field of photonics in biology by involving biomedical scientists in each and every aspect of development and design, and cognisant of the wide variety of current platforms that require adaptability to such modalities. In flIMAGIN3D: bringing together representatives with different applications and backgrounds, we will identify and overcome barriers to FLIM imaging by developing the next generation of scientists who will develop a FLIM platform capable of extracting the greatest amount of information possible in a stream-lined, accurate and user-friendly manner in order to understand biology in disease, differentiation, development and interventions at a high resolution. To achieve this goal, the trained scientists will develop cheaper advanced hardware components, with user friendly software that can build precise libraries for accurate machine learning classifications and plug-and-play platforms and sensors to facilitate a wide range of applications.

Original text from CORDIS.

Participants

  • THE PROVOST, FELLOWS, FOUNDATION SCHOLARS & THE OTHER MEMBERS OF BOARD, OF THE COLLEGE OF THE HOLY & UNDIVIDED TRINITY OF QUEEN ELIZABETH NEAR DUBLIN · DublinCoordinatorIreland
  • EBERHARD KARLS UNIVERSITAET TUEBINGEN · TuebingenGermany
  • KING'S COLLEGE LONDON · LondonUnited Kingdom
  • KOBENHAVNS UNIVERSITET · KOBENHAVNDenmark
  • LAMBERT INSTRUMENTS BV · GRONINGENNetherlands
  • LEICA MICROSYSTEMS CMS GMBH · WetzlarGermany
  • MOAB Srl · VicenzaItaly
  • NATURWISSENSCHAFTLICHES UND MEDIZINISCHES INSTITUT AN DER UNIVERSITAET TUEBINGEN · ReutlingenGermany
  • PICOQUANT INNOVATIONS GMBH · BerlinGermany
  • POLITECNICO DI MILANO · MilanoItaly
  • STICHTING HET NEDERLANDS KANKER INSTITUUT-ANTONI VAN LEEUWENHOEK ZIEKENHUIS · AmsterdamNetherlands
  • UNIVERSITEIT GENT · GentBelgium

Links

Data: CORDIS, © European Union