gutENCODE · Decoding the transcriptional networks controlling the adult Drosophila midgut compartmentalization
7РП — „Хора“ (Действия „Мария Кюри“)
- Период
- 2013-05-01 → 2015-04-30
- Финансиране от ЕС
- 184 709 €
- Участници
- 1
- Схема
- MC-IEF
Линиите свързват координатора с партньорите.
Накратко на български
Генните мрежи, които контролират разделянето на средното черво при плодовите мухи на различни зони, са в центъра на анализа. Познаването на тази структура помага за по-доброто разбиране на човешкия стомашно-чревен тракт и действието на инсектицидите.
Кратко обяснение, генерирано от езиков модел по текста на CORDIS. Оригиналът е по-долу.
Резултати накратко
Decoding the transcriptional networks controlling the adult Drosophila midgut compartmentalization
The average adult human gut is approximately 10 meters in length, with a surface area of approximately 200 m2. The inner lining functions primarily to digest and absorb nutrients, but as it comes into direct contact with the external environment, it is constantly faced with a wide variety of pathogens. Despite its importance, our understanding of this complex organ has been limited by the scarce attention it has historically received from scientists beyond the field of gastroenterology per se. However, recent years have seen an increased awareness from both the public and the scientists alike regarding its importance. This is not only true in mammals but also in insects for which very little is known about gut structure and function. Since the insect gut is an essential passage for several human parasites, as well as the main target of insecticides, a better knowledge of this organ will have applied outcomes. In both structure and function, the Drosophila gut bears many similarities with the human gastrointestinal tract. It consists of a simple epithelial tube surrounded by visceral muscles, nerves, and tracheae. Like mammals, the Drosophila gut is renewed by stem cells and longitudinally compartmentalized. Using morphometric, histological and genetic approaches, we have recently generated a detailed atlas of the Drosophila adult midgut. Our study showed that the adult midgut can be divided into 6 regions and 14 sub-regions revealing an underlying complexity that was hitherto not appreciated. Our project aimed to identify gene regulatory networks underlying the Drosophila midgut compartmentalization. We initially searched for new genes that could explain the differential properties of stem cells along the anterior-posterior axis at the origin of this compartmentalization. This led us to the identification of a new gene, Sox21a, encoding a transcription factor which orchestrates the differentiation of stem cells in various enterocyte types. Taking in consideration the importance of this gene and the observation that loss-of-function mutations in these genes cause intestinal tumors, we focused most of our attention on the role of this gene. The adult fly midgut contains multipotent intestinal stem cells (ISCs) that differentiate into either an absorptive enterocyte or a secretory enteroendocrine cell, through an intermediate but already committed phase, called enteroblast. We identified that the Drosophila Sox transcription factor, Sox21a, controls the differentiation of ISCs with marked differences between the anterior and the posterior midgut. This transcription factor is responsible for the differentiation program mediated by the Jak/Stat signaling in both normal and regenerating midguts following damage. We observed that the loss of Sox21a blocks stem cells at the enteroblast state, leading to the formation of tumors that invade the lumen of the midgut. Sox21a-mutant derived tumors are especially aggressive in the anterior midgut, as macroscopic tumors can be found in all old Sox21a mutant flies. We could show that in absence of Sox21a, progenitor cells cannot differentiate and stimulate the proliferation of surrounding stem cells, thereby promoting a hyperplastic growth. This effect is specific of the anterior midgut as it was not observed in the posterior part of the digestive tract. An increase in some secreted factors (JAK-STAT ligands, epidermal growth factors) was found to be functionally important for the non-cell autonomous growth effect. Our study provides a model of tumor in which a failure in the differentiation program leads to tumor formation and aggressiveness. Thus, our study leads to the identification of a new gene involved in stem cell differentiation in the midgut with differential effect along the midgut. It also provides a model of cancer as mutation in Sox21a induces spontaneous tumors in the anterior part of the gut. Using genetic tools, we have deciphered the cause of these tumors. Our study shows that the blockage of differentiation is sufficient to induce the release of mitogenic factors that induces stem cell proliferation and the formation of a tumor by affecting the surrounding cells through the release of Reactive Oxygen Species. This project has led to the discovery of an important aspect of Drosophila midgut compartmentalization by identifying the mechanisms underlying intestinal epithelium differentiation in different cell type of the gut. Our findings are relevant to certain human intestinal pathologies. Due to the conserved functions of SOX transcription factors in Drosophila and mammals, this project is expected to impact the study of human intestinal development and cancer.
Текст от CORDIS, на английски · Данни: CORDIS, © Европейски съюз
Цел на проекта
In recent years, the contribution of gut to health and disease, as well as the mechanisms important for gut homeostasis, like the maintenance of intestinal stem cells, have just began to be unraveled. Due to its general importance, studies addressing intestinal organization and physiology and, more generally, the question of how this organ functions as a whole, will become one of the most promising areas of research. In all animals, the mature gut is characterized by a succession of distinct compartments, which all fulfil important physiological function. However, how gut compartmentalization and the specialization of the different regions are controlled is largely unsolved in both Drosophila and mammals. The host lab has recently defined different sub-domains of the adult Drosophila midgut using both morphological and genetic criteria. This proposal aims to further unravel gene regulatory networks that control formation and function of each compartment, using a combination of state-of-the-art genetic, genomic, molecular and computational approaches. First, cis-regulatory elements (CREs) specific for different gut compartments will be systematically identified using ChIP-seq; second, key transcription factors interacting with compartment-specific CREs will be elucidated by yeast one-hybrid screens; third, the function of key transcriptional regulators in gut formation and maintenance, in particular the HOX transcription factors, will be studied using molecular, biochemical and genetic tools; and finally, I will apply computational tools to globally predict compartment-specific CREs based on the co-occupancy of key transcription factors identified above. This study will significantly advance our understanding of the mechanisms underlying the gut function, and will also have a major impact on understanding regulatory programs crucial for proper gut function in mammals.
Оригинален текст от CORDIS (на английски).
Участници
- ECOLE POLYTECHNIQUE FEDERALE DE LAUSANNE · LausanneКоординаторШвейцария
Връзки
Данни: CORDIS, © Европейски съюз
