EvoMachine-Phage · Using the Evolution Machine to determine the mechanism of a novel Phage-Induced High-Cell-Density (PIHCD) phenotype
„Хоризонт 2020“ — Действия „Мария Склодовска-Кюри“
- Период
- 2017-04-01 → 2019-03-31
- Финансиране от ЕС
- 173 076 €
- Участници
- 1
- Схема
- MSCA-IF-EF-ST
Линиите свързват координатора с партньорите.
Накратко на български
Бактериофагите (вируси, които атакуват бактерии) се изследват, за да се разбере как някои от тях стимулират необичайно силен растеж на бактериалните клетки. По-доброто познаване на този механизъм помага при разработването на нови терапии срещу бактерии, устойчиви на антибиотици.
Кратко обяснение, генерирано от езиков модел по текста на CORDIS. Оригиналът е по-долу.
Резултати накратко
Using the Evolution Machine to determine the mechanism of a novel Phage-Induced High-Cell-Density (PIHCD) phenotype
Bacteriophages (phages) are the major predators of bacteria on this planet and outnumber their prokaryotic prey by an order of magnitude. Phages are intimately involved in a range of biological processes from carbon cycling to the maintenance of human health. One rising global threat to human health is the emergence of bacteria that are resistant to all known antibiotics. For example, a recent study estimated 33,000 people die each in year in Europe due to infection by multi-drug resistant bacteria making the burden of these infections comparable to the combined impact of HIV/AIDs, Tuberculosis, and Influenza. The ability for phages to specifically target and kill bacteria combined with the desperate need for new antibiotics has led to a renaissance in the development of phage-based therapeutics. To develop the most effective strategies involving phage and phage-based products in the war against multi-drug resistant bacteria a better understanding of basic phage biology is required. Phages require a bacterial host to propagate and are therefore locked in a constant arms race with their hosts to evade detection while the host develops their own counterattack strategies. The goal of this project was to better understand this molecular arms race by determining the mechanism of a phage-induced high bacterial growth phenotype, described for the first time here. The phenotype was discovered by combining a mixture of naturally-occurring phages taken directly from a local compost heap in Paris. The first step was to determine the phage(s) responsible for the high growth phenotype. Our approach to investigate this newly-described phenotype was to isolate and grow phages with their hosts in thousands of small sub-microliter droplets using a newly developed millifluidic device created by MilliDrop instruments, a spinoff biotech company founded at the institute where the work was performed (ESPCI Paris). The MilliDrop Analyzer provides excellent bacterial growth conditions by keeping bacterial cells in constant motion. In addition the MilliDrop analyzer provides the opportunity to select specific droplets of interest that can
Текст от CORDIS, на английски · Данни: CORDIS, © Европейски съюз
Цел на проекта
Bacteriophages (phages) drive the evolution of bacteria by antagonistic coevolution and by promoting transfer of genetic material between bacteria. Phages are intimately involved in a range of biological processes from carbon cycling to the maintenance of human health. Despite their global importance the coevolution between natural phage communities and their bacterial hosts remains poorly understood. This project seeks to understand the mechanism behind a Phage-Induced High-Cell-Density (PIHCD) phenotype using a droplet-based microfluidic device termed the Evolution Machine, developed at the proposed institution (ESPCI Paris). Work Package 1 (WP1) will use the Evolution Machine to determine and characterize the phage(s) responsible for the PIHCD phenotype through coinfection with their Pseudomonas fluorescens host. WP2 will determine the mechanistic basis of the PIHCD phenotype using transcriptomics and genetic manipulation. Finally, in WP3 the long term coevolution between phage(s) and host will be investigated using the droplet-level selection capabilities of the Evolution Machine combined with comparative genomic analysis. Through this fellowship ESPCI Paris will gain from my expertise in molecular biology and bioinformatics while I will develop new skills in microbiology (phage-host coevolution and genetic manipulation) and microfluidic technology (Evolution Machine).
Оригинален текст от CORDIS (на английски).
Участници
- ECOLE SUPERIEURE DE PHYSIQUE ET DECHIMIE INDUSTRIELLES DE LA VILLE DEPARIS · ParisКоординаторФранция
Връзки
Данни: CORDIS, © Европейски съюз
