TEI · Development of a model system to study the role of chromatin factors during transgenerational epigenetic inheritance (TEI) in C. elegans
„Хоризонт 2020“ — Действия „Мария Склодовска-Кюри“
- Период
- 2017-05-01 → 2019-04-30
- Финансиране от ЕС
- 183 455 €
- Участници
- 1
- Схема
- MSCA-IF-EF-ST
Линиите свързват координатора с партньорите.
Накратко на български
Механизмите за предаване на епигенетична информация при червеите C. elegans разкриват как протеините PARP потискат „егоистични“ генетични елементи чрез сигнали за увреждане на ДНК. Разбирането на тези процеси може да помогне при разработването на терапии за рак на гърдата, яйчниците и неврологични разстройства.
Кратко обяснение, генерирано от езиков модел по текста на CORDIS. Оригиналът е по-долу.
Резултати накратко
Development of a model system to study the role of chromatin factors during transgenerational epigenetic inheritance (TEI) in C. elegans
The main purpose of the project was to study the biochemistry of a single locus in the C. elegans genome and discover novel pathways in gene silencing and transgenerational epigenetic inheritance (TEI). So far, we have established a unique technology for the first time in C. elegans and discovered a new pathway that silences selfish elements such as transposons. Unexpectedly, this new pathway functions independent of the germline piRNA pathway and comprises poly-ADP polymerases (PARPs), which are very well studied for DNA damage recognition in humans and mice. Here as a result of our project, we propose a new pathway in C. elegans that uses DNA damage as a signal on transposons for silencing machinery independently of small RNA pathways. As a concept, DNA damage is used as a signal for non-self recognition as well as a defence mechanism in bacterial CRISPR and paramecium DNA elimination mechanisms. Further experiments in this project will detail the mechanistic aspects of this new pathway. One component of this new pathway is an uncharacterised protein with a catalytically dead PARP (poly-ADP polymerase) domain. This finding is crucial since PARP enzymes are important targets in breast and ovarian cancer patients. Further understanding of PARP enzyme regulation and inhibition in C. elegans might have potential therapeutic applications for patients with breast and ovarian cancer. What is more, a potential role for PARP enzymes has been reported in immunological and neurobiological disorders. Our discovery do not just have a potential for a therapeutic application for cancer, but also an additional understanding in neurobiological and immunological disorders.
Текст от CORDIS, на английски · Данни: CORDIS, © Европейски съюз
Цел на проекта
Non DNA-sequence based inheritance has been observed in many organisms from microbes to man and likely impacts public health. The mechanisms of non DNA-sequence based inheritance remain largely unknown. However, some examples of non DNA-sequence based inheritance in mammals, plants and invertebrates are linked to the control of selfish, transposable elements in the genome. Here we propose to discover the mechanistic basis of multi-generational non DNA-sequence based inheritance, also referred to as transgenerational epigenetic inheritance (TEI), using the laboratory animal model Caenorhabditis elegans. Specifically, our goal is to identify chromatin and non-coding RNA “epigenetic” marks that transfer information from generation to generation in C. elegans. C. elegans is a great model for this work as it has a generation time of only three days, has a powerful genetics toolkit and its chromatin and RNA pathways are largely conserved in humans. Towards this goal we have established a novel assay we named piRNA-related insertional chromatin immunoprecipitation (piChIP). Using this piChIP system, our specific aims are:Aim-1: Identification of novel non-coding RNAs in the germline nuclear RNAi pathway- Method: RNA-seqAim-2: Identification of novel proteins and histone PTMs in the germline nuclear RNAi pathway- Method: SILAC proteomics and Mass Spectrometry
Оригинален текст от CORDIS (на английски).
Участници
- THE CHANCELLOR MASTERS AND SCHOLARS OF THE UNIVERSITY OF CAMBRIDGE · CAMBRIDGEКоординаторОбединеното кралство
Връзки
Данни: CORDIS, © Европейски съюз
