H2020Индивидуална стипендия2019–2021

EVOMET · The rise and fall of metastatic clones under immune attack

„Хоризонт 2020“ — Действия „Мария Склодовска-Кюри“

Период
2019-05-01 → 2021-08-07
Финансиране от ЕС
224 934 €
Участници
1
Схема
MSCA-IF-EF-ST

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Накратко на български

Еволюцията на раковите клетки под натиска на имунната система се проучва чрез анализ на мутациите, които позволяват на метастазите да оцелеят. Това помага да се разберат механизмите, поради които някои пациенти не реагират на имунотерапия.

Този кратък обзор е генериран от изкуствен интелект

Кратко обяснение, генерирано от езиков модел по текста на CORDIS. Оригиналът е по-долу.

Резултати накратко

The rise and fall of metastatic clones under immune attack

Charles Darwin proposed more than 100 years ago that species evolved by means of natural selection. But selective forces not only act on organisms, they also govern the evolution of the cells in our body. One of these forces is the immune system that, besides protecting us from viruses and bacteria, recognises our own faulty somatic cells and ultimately shapes the emergence of cancer in a process called immunoediting. However, to what extent the genome of our cells undergoes immunoediting, and what are the determinants that predispose us to develop cancer and metastasis remain poorly understood. Over the last decade, next-generation sequencing (NGS) technologies have allowed us to explore the landscape of the genetic causes of cancer. However, no consistent drivers of metastasis have been identified so far and cancer is still a disease of concern. In parallel, the immune system has gained relevance in the clinical management of cancer thanks to the incredible results obtained in patients treated with immune checkpoint inhibitors (ICIs). ICIs unmask the patient own's immune system to act against malignant cells leading to complete or partial regressions in a substantial number of patients. Nonetheless, many patients fail to respond to the treatment and, to date, we lack scientific knowledge to understand the mechanisms of this resistance. In my Marie-Curie project, I proposed a simple mechanism of evolutionary adaptation driven by the immune-mediated negative selection against growing tumors harbouring immunogenic mutations. This process is intrinsically linked to the primary resistance to treatment in metastatic tumors. Tumors that have been subjected to the selective pressures of a healthy immune system can either be immune-adapted, by depleting all immunogenic mutations, or immune-escaped, by acquiring mechanisms of immune evasion. Therefore, understanding the interaction between the immune system and cancer progression could help us to differentiate between individuals which are sensitive or resistant to immunotherapies, ultimately reducing the overall burden of the current standard of care in the standard setting of clinical practice. I developed a mathematical model to theoretically demonstrate the process of immunoediting during tumor growth, and implemented a computational method to determine the levels of immune selection acting in primary and metastatic tumors. I demonstrated how an evolutionary metric could differentiate between patients that are going to benefit from immunotherapeutic agents based on the personalized genomic data.

Текст от CORDIS, на английски · Данни: CORDIS, © Европейски съюз

Цел на проекта

Colorectal cancer is the second most common cancer in Europe, and although screening has drastically increased survival, a fraction of patients still develops metastatic disease. These patients have a 5-year survival rate of 14% compared to 70% for those non-metastatic (SEER 18). For the majority of cases, the primary tumour is successfully resected, but disease relapse arises due to undetectable metastases. How metastatic clones arise within the primary tumor and adapt to their microenvironment acquiring the capacity of colonize new niches remain unknown. In this project, we aim to use evolutionary analysis combined with state of the art high-throughput technologies to analyse the relationship between the immune system and the progression to metastatic disease. Recently, Zapata and colleagues analysed the relationship between natural selection and the immune system using more than 20 publicly available cancer datasets. The results demonstrated that the presence of neoantigens in the course of tumour development is constrained by the strength of immune activity (immunoediting). In metastasis, malignant clones must escape immune surveillance to colonise new environments. Therefore, we hypothesize that the presence of neoantigens under negative selection in primary tumours will inform us of the cancer cells' ability to disseminate, and ultimately, settle in distant niches. To test our hypothesis, we will develop a patient- specific method to quantify immunoediting across three different cohorts of primary-metastasis matched samples. Ultimately, the extent of immunoediting can be used to explain the underlying causes of metastatic progression allowing, in the future, the development of better treatment strategies.

Оригинален текст от CORDIS (на английски).

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Данни: CORDIS, © Европейски съюз